The Venetian church of Agios Nikitas (13th century) is located approximately 300m NE of Fragokastelo castle, on the ruins of an Early Christian Basilica of the 6th century. The walls bear frescoes from the Venetian era.
The Monastery of the Transfiguration of Christ in Nispitas area, is located 4km southwest of Neapolis. The monastery was deserted during the Turkish Occupation of Crete and only the church has survived until today. Around the chapel there are some ruins of the old monastery complex.
One of the most beautiful caves dedicated Saint Anthony is located in the village Fotinos in the center of Rethymnon prefecture. This historic village is well hidden in dense oak forest and is named after a general of Nikiforos Fokas, Fotinos.
The small village of Prodromi at province Selino hosts some very old temples with wall frescues of the Venetian era. One of them, Panagia Skafidiani is located at position Skafidakia or Skafidia and has beautiful views to the surrounding area. Inside it bears frescoes dating back from 1347 by painter Ioakim, who belonged to the workshop of the famous painter of Eastern Crete, Ioannis Pagomenos.
The church of Lord Christ the Savior is a single-aisled with two arches and exquisite frescoes dedicated to the Transformation of Christ. An inscription of 1303 indicates that the painters were Theodoros Daniel and Michael Veneris. The narthex frescoes date back from the 15th century.
The church of St Anna at settlement Anisaraki by Kandanos is one of the most important Byzantine churches of Crete, adorned with very important frescoes dating back from 1457-1462. The iconostasis was painted and bears wooden screen.
The church of St. Anne by Opsigias is a double-aisled church (originally sibgle-aisled with an extra aisled attached later). The north wall collapsed in the 13th century and was rebuilt with West influences. The church was restored in 1960.